BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D11SP1|AL429902
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1262 1631 0.0
>3x_Contig1262
Length = 7137
Score = 1631 bits (821), Expect = 0.0
Identities = 830/835 (99%)
Strand = Plus / Minus
Query: 1 gatctgttctgatctgaagggaattgcattaaaaccttgtaatttccagctagaactgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5790 gatctgttctgatctgaagggaattgcattaaaaccttgtaatttccagctagaactgct 5731
Query: 61 ctcttttttttacatcgctgtttgagtttcaatctggtttctctaagctgactgccccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5730 ctcttttttttacatcgctgtttgagtttcaatctggtttctctaagctgactgccccta 5671
Query: 121 ttatataattcccactacagccggtaaaagatagacaagcgcttgtcgaacttccgtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5670 ttatataattcccactacagccggtaaaagatagacaagcgcttgtcgaacttccgtaca 5611
Query: 181 gtaatcaagactctccacagaagaacggaaagaacacacaaaacatctttttatgctaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5610 gtaatcaagactctccacagaagaacggaaagaacacacaaaacatctttttatgctaac 5551
Query: 241 ttgggaacttaacactaccttacgtttgcacaccattatttcattttttttcttgttccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5550 ttgggaacttaacactaccttacgtttgcacaccattatttcattttttttcttgttccg 5491
Query: 301 tttattcttcttcttcttcttcttcttcttcttctctgcttgaagttaggaaggaactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5490 tttattcttcttcttcttcttcttcttcttcttctctgcttgaagttaggaaggaactga 5431
Query: 361 actgaaaaattggataccaagctaaacaaagaaaaaaaaacataattacctaattgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5430 actgaaaaattggataccaagctaaacaaagaaaaaaaaacataattacctaattgttat 5371
Query: 421 taaaaagggccagttctctgaccagaaaaaaagataaccagttcgtccatatttaattaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5370 taaaaagggccagttctctgaccagaaaaaaagataaccagttcgtccatatttaattaa 5311
Query: 481 gtctgggaatcgaacgtagaggaataggrgtgccagaactatacgttagttcactgatat 540
|||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5310 gtctggaaatcgaacgtagaggaataggagtaccagaactatacgttagttcactgatat 5251
Query: 541 ctaggrattctctaggaacagttcaagaagagaccaaaaaatttcttcgaagcaaagcat 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5250 ctaggaattctctaggaacagttcaagaagagaccaaaaaatttcttcgaagcaaagcat 5191
Query: 601 ttgaatccaatccaattacctagtatttgggtaacgtattcattgattttttcttcgctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5190 ttgaatccaatccaattacctagtatttgggtaacgtattcattgattttttcttcgctt 5131
Query: 661 ctggcttttttttctttcttgaatttattcacttctattttatttcatcttattttgaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5130 ctggcttttttttctttcttgaatttattcacttctattttatttcatcttattttgaac 5071
Query: 721 tgcattgcattgcgtgtttttgtttgattcagtaagattttttgttattctgtctcattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5070 tgcattgcattgcgtgtttttgtttgattcagtaagattttttgttattctgtctcattt 5011
Query: 781 taagcaagcgtggtctgctatcatacgtggggktgtactatcagttggtcgatca 835
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5010 taagcaagcgtggtctgctatcatacgtggggttgtactatcagttggtcgatca 4956
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,335
Number of Sequences: 1807
Number of extensions: 13335
Number of successful extensions: 898
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)